CPSC536A Bioinformatics Mini-Workshop 2002
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When? | Wednesday, April 17th, 10:00-16:30 |
Where? | Room 288, CICSR/CS Building (CICSR Boardroom) |
About the Event
This mini-workshop marks the end of
CPSC 536A,
a graduate course on bioinformatics
at the UBC Computer Science Department.
The course covered a wide range of topics in bioinformatics,
and as one major component of their course work, students
selected and worked on a project in a particular area of bioinformatics.
The results from these projects will be presented and discussed
at this mini-workshop, which is intended to make this work accessible
to a wider audience interested in bioinformatics topics,
and to give the students the chance of presenting their
work in a format and under conditions which are close to
the standards of the scientific community.
The technical talks will have a duration of 30min each, and after each
talk there will be a 10-15min discussion period.
The closing discussion is intended to involve all participants
and will provide the opportunity to discuss general
aspects of computational challenges of bioinformatics,
weaknesses of present approaches, approaches for future research,
etc.
Preliminary Schedule
10:00-10:15 | Opening Remarks and Overview |
10:15-11:45 | Session 1: |
Support Vector Machine Classification of Cancer Using
Gene Expression Data
(Zhimin Chen) |
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A Genetic Algorithm for the 2D HP Protein Folding Problem
(Alena Shmygelska, Rosalia Aguirre-Hernandez) |
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12:00-12:45 | Session 2: |
Extracting Biologically Relevant Common Motifs from
Protein Sequences
(Jack Nansheng Chen, Jack Xiang-Jia Min, Xiaohong Zhao, Jason Xun Zhang) |
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14:15-15:45 | Session 3: |
Fast Approaches to Designing RNA Molecules
(Viann W. Chan, Daniel Archambault, Peter Huang, Barry Po) |
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A New Algorithm for Inverse Folding of RNA
(Mirela Andronescu, Firas Hamze, Frank Hutter, Anthony P. Fejes) |
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15:45-16:00 | Closing Remarks and Discussion |
Organisers / Contact Information
Anne Condon
and Holger Hoos
University of British Columbia
Department of Computer Science
2366 Main Mall
Vancouver, BC, V6T 1Z4, Canada